U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CAMTA1 calmodulin binding transcription activator 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

    Gene ID: 111544623, updated on 15-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CAMTA1
    Gene description
    calmodulin binding transcription activator 1
    See related
    Ensembl:ENSPTEG00000000211
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Piliocolobus tephrosceles
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CAMTA1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    102 current ASM277652v3 (GCF_002776525.3) 1 NC_045434.1 (214162464..215116112, complement)
    100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317273.1 (5228676..6182802)

    Chromosome 1 - NC_045434.1Genomic Context describing neighboring genes Neighboring gene period circadian regulator 3 Neighboring gene vesicle associated membrane protein 3 Neighboring gene U1 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC111544556

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    calmodulin-binding transcription activator 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM277652v3

    Genomic

    1. NC_045434.1 Reference ASM277652v3

      Range
      214162464..215116112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031934754.1 → XP_031790614.1  calmodulin-binding transcription activator 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C9G9M3
      Conserved Domains (4) summary
      smart01076
      Location:67 → 183
      CG-1; CG-1 domains are highly conserved domains of about 130 amino-acid residues
      sd00045
      Location:1064 → 1107
      ANK; ANK repeat [structural motif]
      pfam01833
      Location:873 → 952
      TIG; IPT/TIG domain
      pfam12796
      Location:1069 → 1161
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_023215241.1 → XP_023071009.1  calmodulin-binding transcription activator 1 isoform X8

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    3. XM_023215238.1 → XP_023071006.1  calmodulin-binding transcription activator 1 isoform X7

      Conserved Domains (3) summary
      COG5022
      Location:435 → 561
      COG5022; Myosin heavy chain [General function prediction only]
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:93 → 185
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_023215237.1 → XP_023071005.1  calmodulin-binding transcription activator 1 isoform X6

      Conserved Domains (3) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]
      cl27381
      Location:435 → 561
      Myosin_head; Myosin head (motor domain)

    5. XM_023215232.1 → XP_023071000.1  calmodulin-binding transcription activator 1 isoform X3

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    6. XM_023215244.1 → XP_023071012.1  calmodulin-binding transcription activator 1 isoform X9

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    7. XM_023215235.1 → XP_023071003.1  calmodulin-binding transcription activator 1 isoform X5

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    8. XM_023215230.1 → XP_023070998.1  calmodulin-binding transcription activator 1 isoform X2

      Conserved Domains (2) summary
      cd00204
      Location:101 → 220
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:100 → 143
      ANK; ANK repeat [structural motif]

    9. XM_023215240.2 → XP_023071008.1  calmodulin-binding transcription activator 1 isoform X8

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    10. XM_023215243.2 → XP_023071011.1  calmodulin-binding transcription activator 1 isoform X9

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    11. XM_031934762.1 → XP_031790622.1  calmodulin-binding transcription activator 1 isoform X7

      Conserved Domains (3) summary
      COG5022
      Location:435 → 561
      COG5022; Myosin heavy chain [General function prediction only]
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:93 → 185
      Ank_2; Ankyrin repeats (3 copies)

    12. XM_023215236.2 → XP_023071004.1  calmodulin-binding transcription activator 1 isoform X6

      Conserved Domains (3) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]
      cl27381
      Location:435 → 561
      Myosin_head; Myosin head (motor domain)

    13. XM_023215234.2 → XP_023071002.1  calmodulin-binding transcription activator 1 isoform X5

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    14. XM_023215231.2 → XP_023070999.1  calmodulin-binding transcription activator 1 isoform X3

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]

    15. XM_023215233.2 → XP_023071001.1  calmodulin-binding transcription activator 1 isoform X4

      Conserved Domains (2) summary
      cd00204
      Location:89 → 208
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:88 → 131
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.