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    LOC110654269 DELLA protein GAI [ Hevea brasiliensis (rubber tree) ]

    Gene ID: 110654269, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC110654269
    Gene description
    DELLA protein GAI
    Locus tag
    P3X46_029453
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hevea brasiliensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
    Also known as
    GAI; RGA1; HbGAIp
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    Genomic context

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    See LOC110654269 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 16 NC_079508.1 (61733383..61735572)
    100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018745760.1 (152401..154640, complement)

    Chromosome 16 - NC_079508.1Genomic Context describing neighboring genes Neighboring gene geranylgeranyl pyrophosphate synthase 7, chloroplastic Neighboring gene glutathione S-transferase DHAR3, chloroplastic-like Neighboring gene uncharacterized LOC110654259 Neighboring gene protein PTST, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the rubber tree Hevea brasiliensis. Rahman AY, et al. BMC Genomics, 2013 Feb 2. PMID 23375136, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hyperosmotic salinity response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in jasmonic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of gibberellic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of seed germination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of reactive oxygen species metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of seed dormancy process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to abscisic acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to ethylene IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in salicylic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DELLA protein GAI
    Names
    DELLA protein RGA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3005281v1 Primary Assembly

    Genomic

    1. NC_079508.1 Reference ASM3005281v1 Primary Assembly

      Range
      61733383..61735572
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021810192.2 → XP_021665884.2  DELLA protein GAI

      UniProtKB/TrEMBL
      A0A0N9HIY3, A0A1L1XVZ6
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases