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    Grsf1 G-rich RNA sequence binding factor 1 [ Meriones unguiculatus (Mongolian gerbil) ]

    Gene ID: 110541832, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Grsf1
    Gene description
    G-rich RNA sequence binding factor 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meriones unguiculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
    Orthologs
    human mouse all
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    Genomic context

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    See Grsf1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 3 NC_083351.1 (162336224..162349709, complement)
    100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018665001.1 (10570..24114)

    Chromosome 3 - NC_083351.1Genomic Context describing neighboring genes Neighboring gene UTP3 small subunit processome component Neighboring gene RUN and FYVE domain containing 3 Neighboring gene MOB kinase activator 1B Neighboring gene large ribosomal subunit protein eL42-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    G-rich sequence factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bangor_MerUng_6.1

    Genomic

    1. NC_083351.1 Reference Bangor_MerUng_6.1

      Range
      162336224..162349709 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021628528.2 → XP_021484203.1  G-rich sequence factor 1 isoform X1

      Conserved Domains (4) summary
      COG0724
      Location:304 → 455
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12505
      Location:246 → 319
      RRM2_GRSF1; RNA recognition motif 2 in G-rich sequence factor 1 (GRSF-1) and similar proteins
      cd12730
      Location:146 → 224
      RRM1_GRSF1; RNA recognition motif 1 in G-rich sequence factor 1 (GRSF-1) and similar proteins
      cd12733
      Location:397 → 471
      RRM3_GRSF1; RNA recognition motif 3 in G-rich sequence factor 1 (GRSF-1) and similar proteins

    2. XM_021628529.2 → XP_021484204.1  G-rich sequence factor 1 isoform X3

      Conserved Domains (3) summary
      cd12505
      Location:131 → 204
      RRM2_GRSF1; RNA recognition motif 2 in G-rich sequence factor 1 (GRSF-1) and similar proteins
      cd12730
      Location:31 → 109
      RRM1_GRSF1; RNA recognition motif 1 in G-rich sequence factor 1 (GRSF-1) and similar proteins
      cd12733
      Location:282 → 356
      RRM3_GRSF1; RNA recognition motif 3 in G-rich sequence factor 1 (GRSF-1) and similar proteins

    3. XM_060380910.1 → XP_060236893.1  G-rich sequence factor 1 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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