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    BSN bassoon presynaptic cytomatrix protein [ Numida meleagris (helmeted guineafowl) ]

    Gene ID: 110405047, updated on 15-Mar-2024

    Summary

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    Gene symbol
    BSN
    Gene description
    bassoon presynaptic cytomatrix protein
    See related
    Ensembl:ENSNMEG00000010663
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Numida meleagris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
    Orthologs
    human mouse all
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    Genomic context

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    See BSN in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current NumMel1.0 (GCF_002078875.1) 11 NC_034419.1 (2254143..2301197, complement)

    Chromosome 11 - NC_034419.1Genomic Context describing neighboring genes Neighboring gene acylamino-acid-releasing enzyme-like Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene TRAF interacting protein Neighboring gene CaM kinase like vesicle associated Neighboring gene macrophage stimulating 1 receptor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034419.1 Chromosome 11 Reference NumMel1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in presynaptic active zone assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in GABA-ergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein bassoon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NumMel1.0 Primary Assembly

    Genomic

    1. NC_034419.1 Reference NumMel1.0 Primary Assembly

      Range
      2254143..2301197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021409944.1 → XP_021265619.1  protein bassoon

      Related
      ENSNMEP00000011358.1, ENSNMET00000017812.1
      Conserved Domains (3) summary
      cd15773
      Location:50 → 113
      FYVE1_BSN; FYVE-related domain 1 found in protein bassoon
      cd15775
      Location:323 → 387
      FYVE2_BSN; FYVE-related domain 2 found in protein bassoon
      cl26386
      Location:3463 → 3698
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    Nucleotide Protein
    Heading Accession and Version

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