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    FCHSD2 FCH and double SH3 domains 2 [ Odocoileus virginianus (white-tailed deer) ]

    Gene ID: 110143183, updated on 15-Mar-2024

    Summary

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    Gene symbol
    FCHSD2
    Gene description
    FCH and double SH3 domains 2
    See related
    EnsemblRapid:ENSOVIG00010019003
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Odocoileus virginianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
    Orthologs
    human mouse all
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    Genomic context

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    See FCHSD2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018335443.1 (471096..710497, complement)

    NW_018335443.1Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 10 Neighboring gene autophagy related 16 like 2 Neighboring gene small integral membrane protein 15-like Neighboring gene small integral membrane protein 15-like Neighboring gene purinergic receptor P2Y2 Neighboring gene pyrimidinergic receptor P2Y6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018335443 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuromuscular synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuromuscular junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-BAR and double SH3 domains protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ovir.te_1.0 Primary Assembly

    Genomic

    1. NW_018335443.1 Reference Ovir.te_1.0 Primary Assembly

      Range
      471096..710497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020902752.1 → XP_020758411.1  F-BAR and double SH3 domains protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A6J0YB43
      Related
      ENSOVIP00010027041.1, ENSOVIT00010030558.1
      Conserved Domains (4) summary
      cd07677
      Location:16 → 275
      F-BAR_FCHSD2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH and double SH3 domains 2 (FCHSD2)
      cd11761
      Location:495 → 551
      SH3_FCHSD_1; First Src Homology 3 domain of FCH and double SH3 domains proteins
      cd11894
      Location:595 → 650
      SH3_FCHSD2_2; Second Src Homology 3 domain of FCH and double SH3 domains protein 2
      cl25732
      Location:146 → 454
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_020902754.1 → XP_020758413.1  F-BAR and double SH3 domains protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A6J0Y9R9
      Related
      ENSOVIP00010027114.1, ENSOVIT00010030636.1
      Conserved Domains (3) summary
      cd07677
      Location:16 → 275
      F-BAR_FCHSD2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH and double SH3 domains 2 (FCHSD2)
      cd11761
      Location:471 → 527
      SH3_FCHSD_1; First Src Homology 3 domain of FCH and double SH3 domains proteins
      cd11894
      Location:571 → 626
      SH3_FCHSD2_2; Second Src Homology 3 domain of FCH and double SH3 domains protein 2

    3. XM_020902753.1 → XP_020758412.1  F-BAR and double SH3 domains protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A6J0YAZ2
      Conserved Domains (3) summary
      cd07677
      Location:16 → 275
      F-BAR_FCHSD2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH and double SH3 domains 2 (FCHSD2)
      cd11761
      Location:471 → 527
      SH3_FCHSD_1; First Src Homology 3 domain of FCH and double SH3 domains proteins
      cd11894
      Location:571 → 626
      SH3_FCHSD2_2; Second Src Homology 3 domain of FCH and double SH3 domains protein 2
    Nucleotide Protein
    Heading Accession and Version

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