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    SNX12 sorting nexin 12 [ Hipposideros armiger (great roundleaf bat) ]

    Gene ID: 109385599, updated on 30-Mar-2024

    Summary

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    Gene symbol
    SNX12
    Gene description
    sorting nexin 12
    See related
    EnsemblRapid:ENSHARG00000006166
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hipposideros armiger
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros
    Orthologs
    human mouse all
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    Genomic context

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    See SNX12 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM189008v1 (GCF_001890085.1) Unplaced Scaffold NW_017731469.1 (432452..545564)

    NW_017731469.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown CXorf65 homolog Neighboring gene forkhead box O4 Neighboring gene heterogeneous nuclear ribonucleoprotein A/B pseudogene Neighboring gene charged multivesicular body protein 1b-2-like Neighboring gene solute carrier family 7 member 3 Neighboring gene actin, cytoplasmic 2-like Neighboring gene probable ribosome biogenesis protein RLP24 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017731469.1 Unplaced Scaffold Reference ASM189008v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytic recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in late endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of retromer complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hipposideros armiger Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM189008v1 Primary Assembly

    Genomic

    1. NW_017731469.1 Reference ASM189008v1 Primary Assembly

      Range
      432452..545564
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019648037.1 → XP_019503582.1  sorting nexin-12 isoform X2

      UniProtKB/TrEMBL
      A0A8B7RRH8

    2. XM_019648035.1 → XP_019503580.1  sorting nexin-12 isoform X1

      UniProtKB/TrEMBL
      A0A8B7RWP7

    3. XM_019648034.1 → XP_019503579.1  sorting nexin-12 isoform X1

      UniProtKB/TrEMBL
      A0A8B7RWP7
      Related
      ENSHARP00000010296.1, ENSHART00000011836.1

    4. XM_019648036.1 → XP_019503581.1  sorting nexin-12 isoform X1

      UniProtKB/TrEMBL
      A0A8B7RWP7

    5. XM_019648038.1 → XP_019503583.1  sorting nexin-12 isoform X3

      UniProtKB/TrEMBL
      A0A8B7RTD1
      Related
      ENSHARP00000010318.1, ENSHART00000011867.1
    Nucleotide Protein
    Heading Accession and Version

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