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    Rpb8 DNA-directed RNA polymerases I, II, and III subunit Rpb8 [ Drosophila navojoa ]

    Gene ID: 108651571, updated on 16-May-2024

    Summary

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    Gene symbol
    Rpb8
    Gene description
    DNA-directed RNA polymerases I, II, and III subunit Rpb8
    Locus tag
    AWZ03_009502
    See related
    EnsemblRapid:LOC108651571
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila navojoa
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
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    Genomic context

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    See Rpb8 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current UFRJ_Dnav_4.2 (GCF_001654015.2) Unplaced Scaffold NW_022045978.1 (111942..112552)
    100 previous assembly ASM165401v1 (GCF_001654015.1) 4 Unlocalized Scaffold NW_017181430.1 (16356895..16357501)

    NW_022045978.1Genomic Context describing neighboring genes Neighboring gene protein TsetseEP Neighboring gene proline-rich extensin-like protein EPR1 Neighboring gene zinc finger protein OZF Neighboring gene uncharacterized LOC108651552

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerases I, II, and III subunit RPABC3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila navojoa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UFRJ_Dnav_4.2

    Genomic

    1. NW_022045978.1 Reference UFRJ_Dnav_4.2

      Range
      111942..112552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018101371.2 → XP_017956860.1  DNA-directed RNA polymerases I, II, and III subunit RPABC3

      UniProtKB/TrEMBL
      A0A484B5E3
      Related
      XP_017956860.1, XM_018101371.2
      Conserved Domains (1) summary
      smart00658
      Location:2 → 146
      RPOL8c; RNA polymerase subunit 8
    Nucleotide Protein
    Heading Accession and Version

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