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    UBXN6 UBX domain protein 6 [ Protobothrops mucrosquamatus ]

    Gene ID: 107297949, updated on 14-Mar-2024

    Summary

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    Gene symbol
    UBXN6
    Gene description
    UBX domain protein 6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Protobothrops mucrosquamatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
    Orthologs
    human mouse all
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    Genomic context

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    See UBXN6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015389571.1 (183910..201894)

    NW_015389571.1Genomic Context describing neighboring genes Neighboring gene perilipin-3-like Neighboring gene HDGF like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015389571 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UBX domain-containing protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.Mucros_1.0 Primary Assembly

    Genomic

    1. NW_015389571.1 Reference P.Mucros_1.0 Primary Assembly

      Range
      183910..201894
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029286418.1 → XP_029142251.1  UBX domain-containing protein 6

      Conserved Domains (2) summary
      cl15262
      Location:111 → 189
      PUB; PNGase/UBA or UBX (PUB) domain of p97 adaptor proteins
      cd16119
      Location:267 → 338
      UBX_UBXN6; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 6 (UBXN6) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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