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    Irbp18 Inverted repeat binding protein 18 kDa [ Neodiprion lecontei (redheaded pine sawfly) ]

    Gene ID: 107225840, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Irbp18
    Gene description
    Inverted repeat binding protein 18 kDa
    See related
    EnsemblRapid:ENSNLCG00000002264
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neodiprion lecontei
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See Irbp18 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current iyNeoLeco1.1 (GCF_021901455.1) 3 NC_060262.1 (41868021..41871352)
    100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015385230.1 (6063..9250, complement)

    Chromosome 3 - NC_060262.1Genomic Context describing neighboring genes Neighboring gene transportin 3 Neighboring gene chameau Neighboring gene uncharacterized LOC124293757 Neighboring gene G protein alpha s subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCAAT/enhancer-binding protein gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iyNeoLeco1.1

    Genomic

    1. NC_060262.1 Reference iyNeoLeco1.1

      Range
      41868021..41871352
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015666436.2 → XP_015521922.1  CCAAT/enhancer-binding protein gamma

      UniProtKB/TrEMBL
      A0A6J0C5W1
      Related
      ENSNLCP00000003250.1, ENSNLCT00000004298.1
      Conserved Domains (2) summary
      cd14686
      Location:33 → 80
      bZIP; coiled coil [structural motif]
      cl21462
      Location:33 → 84
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    2. XM_046736048.1 → XP_046592004.1  CCAAT/enhancer-binding protein gamma

      UniProtKB/TrEMBL
      A0A6J0C5W1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases