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    LOC107081616 putative sodium-coupled neutral amino acid transporter 10 [ Cyprinodon variegatus (sheepshead minnow) ]

    Gene ID: 107081616, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC107081616
    Gene description
    putative sodium-coupled neutral amino acid transporter 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinodon variegatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC107081616 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015159331.1 (137..593)

    NW_015159331.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015159331.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative sodium-coupled neutral amino acid transporter 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C_variegatus-1.0 Primary Assembly

    Genomic

    1. NW_015159331.1 Reference C_variegatus-1.0 Primary Assembly

      Range
      137..593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015369767.1 → XP_015225253.1  putative sodium-coupled neutral amino acid transporter 10

    Nucleotide Protein
    Heading Accession and Version

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