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    EXPH5 exophilin 5 [ Calidris pugnax (ruff) ]

    Gene ID: 106902619, updated on 3-Aug-2024

    Summary

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    Gene symbol
    EXPH5
    Gene description
    exophilin 5
    See related
    Ensembl:ENSCPUG00000014778
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Calidris pugnax
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
    Orthologs
    human mouse all
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    Genomic context

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    See EXPH5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015094510.1 (28429438..28448535)

    NW_015094510.1Genomic Context describing neighboring genes Neighboring gene vegetative cell wall protein gp1-like Neighboring gene DEAD-box helicase 10 Neighboring gene protein O-glucosyltransferase 3 Neighboring gene ATM serine/threonine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015094510.1 Unplaced Scaffold Reference ASM143184v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exophilin-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM143184v1

    Genomic

    1. NW_015094510.1 Reference ASM143184v1

      Range
      28429438..28448535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014966256.1 → XP_014821742.1  exophilin-5 isoform X2

      Related
      ENSCPUP00000021715.1, ENSCPUT00000025658.1

    2. XM_014966255.1 → XP_014821741.1  exophilin-5 isoform X1

      Related
      ENSCPUP00000021716.1, ENSCPUT00000025659.1
    Nucleotide Protein
    Heading Accession and Version

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