U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CPXM2 carboxypeptidase X, M14 family member 2 [ Calidris pugnax (ruff) ]

    Gene ID: 106889785, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CPXM2
    Gene description
    carboxypeptidase X, M14 family member 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Calidris pugnax
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CPXM2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090865.1 (3687418..3762956, complement)

    NW_015090865.1Genomic Context describing neighboring genes Neighboring gene mitotic checkpoint protein BUB3 Neighboring gene G protein-coupled receptor 26 Neighboring gene carbohydrate sulfotransferase 15 Neighboring gene uncharacterized LOC106889885

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_015090865.1 Unplaced Scaffold Reference ASM143184v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metallocarboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    inactive carboxypeptidase-like protein X2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM143184v1

    Genomic

    1. NW_015090865.1 Reference ASM143184v1

      Range
      3687418..3762956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014945198.1 → XP_014800684.1  inactive carboxypeptidase-like protein X2

      Conserved Domains (4) summary
      cd03869
      Location:366 → 691
      M14_CPX_like; Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup
      cd11308
      Location:695 → 770
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      smart00231
      Location:190 → 345
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
      cd00057
      Location:189 → 344
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.