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    LOC106839352 eukaryotic translation initiation factor 1A, Y-chromosomal-like [ Equus asinus (ass) ]

    Gene ID: 106839352, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC106839352
    Gene description
    eukaryotic translation initiation factor 1A, Y-chromosomal-like
    See related
    Ensembl:ENSEASG00005014703
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus asinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
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    Genomic context

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    See LOC106839352 in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    101 current ASM1607732v2 (GCF_016077325.2) Y NC_052208.1 (11491818..11672903, complement)
    100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014636823.1 (98508..120256, complement)

    Chromosome Y - NC_052208.1Genomic Context describing neighboring genes Neighboring gene zinc finger X-chromosomal protein Neighboring gene protein WWC3-like Neighboring gene heat shock transcription factor, Y-linked-like Neighboring gene heat shock transcription factor, Y-linked-like Neighboring gene sex determining region Y

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 1A, Y-chromosomal-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1607732v2

    Genomic

    1. NC_052208.1 Reference ASM1607732v2

      Range
      11491818..11672903 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014854016.1 → XP_014709502.1  eukaryotic translation initiation factor 1A, Y-chromosomal-like

      UniProtKB/TrEMBL
      A0A8C4MBG6
      Related
      ENSEASP00005052354.1, ENSEAST00005043441.1
      Conserved Domains (1) summary
      PTZ00329
      Location:1 → 131
      PTZ00329; eukaryotic translation initiation factor 1A; Provisional

    RNA

    1. XR_006523116.1 RNA Sequence

    2. XR_006523115.1 RNA Sequence

    3. XR_006523117.1 RNA Sequence

    4. XR_006523111.1 RNA Sequence

    5. XR_006523112.1 RNA Sequence

    6. XR_006523109.1 RNA Sequence

    7. XR_006523114.1 RNA Sequence

    8. XR_006523113.1 RNA Sequence

    9. XR_006523118.1 RNA Sequence

    10. XR_006523110.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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