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    RCBTB1 RCC1 and BTB domain containing protein 1 [ Apteryx mantelli (North Island brown kiwi) ]

    Gene ID: 106489234, updated on 3-Dec-2024

    Summary

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    Gene symbol
    RCBTB1
    Gene description
    RCC1 and BTB domain containing protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apteryx mantelli
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
    Orthologs
    human mouse all
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    Genomic context

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    See RCBTB1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 1 NC_089978.1 (32421585..32447849)
    100 previous assembly AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_013996293.1 (3638519..3664324)

    Chromosome 1 - NC_089978.1Genomic Context describing neighboring genes Neighboring gene SPRY domain containing 7 Neighboring gene karyopherin subunit alpha 3 Neighboring gene SET domain bifurcated histone lysine methyltransferase 2 Neighboring gene uncharacterized LOC136991305

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RCC1 and BTB domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bAptMan1.hap1

    Genomic

    1. NC_089978.1 Reference bAptMan1.hap1

      Range
      32421585..32447849
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_067291883.1 → XP_067147984.1  RCC1 and BTB domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8B7J1T7

    2. XM_067291902.1 → XP_067148003.1  RCC1 and BTB domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8B7IY94

    3. XM_013948400.2 → XP_013803854.1  RCC1 and BTB domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8B7J1T7
      Conserved Domains (4) summary
      smart00225
      Location:377 → 473
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:473 → 531
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      pfam00415
      Location:205 → 254
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam00651
      Location:366 → 470
      BTB; BTB/POZ domain

    4. XM_013948399.2 → XP_013803853.1  RCC1 and BTB domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8B7J1T7
      Conserved Domains (4) summary
      smart00225
      Location:377 → 473
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:473 → 531
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      pfam00415
      Location:205 → 254
      RCC1; Regulator of chromosome condensation (RCC1) repeat
      pfam00651
      Location:366 → 470
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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