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    LOC106414367 eukaryotic translation initiation factor 5B-like [ Brassica napus (rape) ]

    Gene ID: 106414367, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC106414367
    Gene description
    eukaryotic translation initiation factor 5B-like
    Locus tag
    HID58_022198
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica napus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC106414367 in Genome Data Viewer
    Location:
    chromosome: A6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Da-Ae (GCF_020379485.1) A6 NC_063439.1 (9922973..9924030, complement)
    101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A2 NC_027758.2 (27857086..27857948)

    Chromosome A6 - NC_063439.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106351641 Neighboring gene protein ABIL2 Neighboring gene protein IQ-DOMAIN 21 Neighboring gene protein DEFECTIVE IN MERISTEM SILENCING 3 Neighboring gene pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 5B-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Da-Ae Primary Assembly

    Genomic

    1. NC_063439.1 Reference Da-Ae Primary Assembly

      Range
      9922973..9924030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013855040.3 → XP_013710494.1  eukaryotic translation initiation factor 5B-like

      UniProtKB/TrEMBL
      A0A816XA75
      Conserved Domains (2) summary
      cd03703
      Location:4 → 112
      aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
      pfam11987
      Location:112 → 173
      IF-2; Translation-initiation factor 2
    Nucleotide Protein
    Heading Accession and Version

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