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    SYT1 synaptotagmin 1 [ Anser cygnoides (Swan goose) ]

    Gene ID: 106046484, updated on 3-Dec-2024

    Summary

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    Gene symbol
    SYT1
    Gene description
    synaptotagmin 1
    See related
    EnsemblRapid:ENSACDG00000006871
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anser cygnoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
    Also known as
    SytI
    Orthologs
    human mouse all
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    Genomic context

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    See SYT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 1 NC_089873.1 (42648325..43004501)
    100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927832.1 (18229..295140, complement)

    Chromosome 1 - NC_089873.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125179936 Neighboring gene uncharacterized LOC125179638 Neighboring gene uncharacterized LOC125184648 Neighboring gene pro-apoptotic WT1 regulator Neighboring gene protein phosphatase 1 regulatory subunit 12A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning and expression analysis of the synaptotagmin-1 gene in the hypothalamus and pituitary of Huoyan goose during different stages of the egg-laying cycle. Luan X, et al. Reprod Biol Endocrinol, 2014 Aug 21. PMID 25146222, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dense core granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in exocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-1
    Names
    Synaptotagmin I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Taihu_goose_T2T_genome Primary Assembly

    Genomic

    1. NC_089873.1 Reference Taihu_goose_T2T_genome Primary Assembly

      Range
      42648325..43004501
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066993398.1 → XP_066849499.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9DIC6

    2. XM_066993412.1 → XP_066849513.1  synaptotagmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8B9DIC6

    3. XM_066993404.1 → XP_066849505.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9DIC6

    4. XM_066993406.1 → XP_066849507.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9DIC6

    5. XM_066993407.1 → XP_066849508.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9DIC6

    6. XM_066993403.1 → XP_066849504.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9DIC6

    7. XM_066993410.1 → XP_066849511.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8B9DIC6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A075F932.1 GenPept UniProtKB/Swiss-Prot:A0A075F932

    Gene LinkOut

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