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    LOC105992328 lymphocyte antigen 6A-2/6E-1-like [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105992328, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC105992328
    Gene description
    lymphocyte antigen 6A-2/6E-1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
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    Genomic context

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    See LOC105992328 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267298.1 (12566109..12567756, complement)

    NW_012267298.1Genomic Context describing neighboring genes Neighboring gene septin-7 pseudogene Neighboring gene lymphocyte antigen 6E-like Neighboring gene lymphocyte antigen 6C1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012267298.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylcholine receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables acetylcholine receptor inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in acetylcholine receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lymphocyte antigen 6A-2/6E-1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267298.1 Reference Dord_2.0

      Range
      12566109..12567756 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013025157.1 → XP_012880611.1  lymphocyte antigen 6A-2/6E-1-like

      See identical proteins and their annotated locations for XP_012880611.1

      UniProtKB/TrEMBL
      A0A1S3FXP6
      Conserved Domains (1) summary
      smart00134
      Location:21 → 105
      LU; Ly-6 antigen / uPA receptor -like domain

    2. XM_013025158.1 → XP_012880612.1  lymphocyte antigen 6A-2/6E-1-like

      See identical proteins and their annotated locations for XP_012880612.1

      UniProtKB/TrEMBL
      A0A1S3FXP6
      Conserved Domains (1) summary
      smart00134
      Location:21 → 105
      LU; Ly-6 antigen / uPA receptor -like domain
    Nucleotide Protein
    Heading Accession and Version

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