U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    klf4 Kruppel-like factor 4 [ Clupea harengus (Atlantic herring) ]

    Gene ID: 105905710, updated on 19-Nov-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    klf4
    Gene description
    Kruppel-like factor 4
    See related
    Ensembl:ENSCHAG00020017384
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Clupea harengus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See klf4 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current Ch_v2.0.2 (GCF_900700415.2) 12 NC_045163.1 (2851363..2855118)

    Chromosome 12 - NC_045163.1Genomic Context describing neighboring genes Neighboring gene alpha-synuclein-like Neighboring gene uncharacterized LOC116222830 Neighboring gene uncharacterized LOC116222831 Neighboring gene RAD23 homolog B, nucleotide excision repair protein Neighboring gene zinc finger protein 462

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_045163.1 Chromosome 12 Reference Ch_v2.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Krueppel-like factor 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Clupea harengus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ch_v2.0.2 Primary Assembly

    Genomic

    1. NC_045163.1 Reference Ch_v2.0.2 Primary Assembly

      Range
      2851363..2855118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012833747.3 → XP_012689201.1  Krueppel-like factor 4

      UniProtKB/TrEMBL
      A0A6P3W5V1
      Related
      ENSCHAP00020039150.1, ENSCHAT00020042031.1
      Conserved Domains (3) summary
      sd00017
      Location:336 → 358
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:334 → 358
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:380 → 405
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.