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    ATP11C ATPase phospholipid transporting 11C [ Propithecus coquereli (Coquerel's sifaka) ]

    Gene ID: 105827246, updated on 13-Mar-2024

    Summary

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    Gene symbol
    ATP11C
    Gene description
    ATPase phospholipid transporting 11C
    See related
    Ensembl:ENSPCOG00000016658
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Propithecus coquereli
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
    Orthologs
    human mouse all
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    Genomic context

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    See ATP11C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012156284.1 (8745568..8925957)

    NW_012156284.1Genomic Context describing neighboring genes Neighboring gene RING finger protein 10-like Neighboring gene chromosome unknown open reading frame, human CXorf66 Neighboring gene U3 small nucleolar ribonucleoprotein protein MPP10-like Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene coagulation factor IX

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012156284.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase-coupled intramembrane lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phospholipid-transporting ATPase IG

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Pcoq_1.0 Primary Assembly

    Genomic

    1. NW_012156284.1 Reference Pcoq_1.0 Primary Assembly

      Range
      8745568..8925957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012665306.1 → XP_012520760.1  phospholipid-transporting ATPase IG

      UniProtKB/TrEMBL
      A0A2K6F8T1
      Related
      ENSPCOP00000010391.1, ENSPCOT00000020969.1
      Conserved Domains (6) summary
      TIGR01652
      Location:40 → 1086
      ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
      pfam00122
      Location:97 → 182
      E1-E2_ATPase; E1-E2 ATPase
      pfam13246
      Location:468 → 572
      Cation_ATPase; Cation transport ATPase (P-type)
      pfam16209
      Location:37 → 90
      PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
      pfam16212
      Location:860 → 1087
      PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
      cl21460
      Location:809 → 838
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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