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    LOC105638582 DELLA protein GAI [ Jatropha curcas ]

    Gene ID: 105638582, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC105638582
    Gene description
    DELLA protein GAI
    Locus tag
    JCGZ_13432
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Jatropha curcas
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
    Also known as
    GRAS37
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    Genomic context

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    See LOC105638582 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023591180.1 (463788..466167, complement)
    101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124408.1 (152483..154638, complement)

    NW_023591180.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105638611 Neighboring gene uncharacterized protein At4g22758 Neighboring gene protein ASYMMETRIC LEAVES 2-like Neighboring gene pentatricopeptide repeat-containing protein At5g39980, chloroplastic Neighboring gene small nucleolar RNA snoR86

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of transcriptome responses and gene expression profiles to cold stress of Jatropha curcas L. Wang H, et al. PLoS One, 2013. PMID 24349370, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hyperosmotic salinity response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in jasmonic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of gibberellic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of seed germination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of reactive oxygen species metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of seed dormancy process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to abscisic acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to ethylene IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in salicylic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DELLA protein GAI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RJC1_Hi-C Primary Assembly

    Genomic

    1. NW_023591180.1 Reference RJC1_Hi-C Primary Assembly

      Range
      463788..466167 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037639214.1 → XP_037495142.1  DELLA protein GAI

      UniProtKB/TrEMBL
      A0A067KAJ2
      Conserved Domains (2) summary
      pfam03514
      Location:228 → 589
      GRAS; GRAS domain family
      pfam12041
      Location:41 → 108
      DELLA; Transcriptional regulator DELLA protein N terminal
    Nucleotide Protein
    Heading Accession and Version

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