U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    FBXO38 F-box protein 38 [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105589853, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    FBXO38
    Gene description
    F-box protein 38
    See related
    Ensembl:ENSCATG00000008057
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FBXO38 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001064.1 (1392764..1451775)

    NW_012001064.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105589852 Neighboring gene serine peptidase inhibitor Kazal type 7 Neighboring gene serine peptidase inhibitor Kazal type 9 Neighboring gene 5-hydroxytryptamine receptor 4 Neighboring gene adrenoceptor beta 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_012001064.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K48-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    F-box only protein 38

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012001064.1 Reference Caty_1.0

      Range
      1392764..1451775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012068698.1 → XP_011924088.1  F-box only protein 38 isoform X1

      See identical proteins and their annotated locations for XP_011924088.1

      UniProtKB/TrEMBL
      A0A2K5KM55
      Related
      ENSCATP00000001771.1, ENSCATT00000008922.1
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    2. XM_012068700.1 → XP_011924090.1  F-box only protein 38 isoform X2

      See identical proteins and their annotated locations for XP_011924090.1

      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    3. XM_012068701.1 → XP_011924091.1  F-box only protein 38 isoform X3

      See identical proteins and their annotated locations for XP_011924091.1

      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    4. XM_012068702.1 → XP_011924092.1  F-box only protein 38 isoform X4

      See identical proteins and their annotated locations for XP_011924092.1

      UniProtKB/TrEMBL
      A0A2K5KM50
      Related
      ENSCATP00000001776.1, ENSCATT00000008961.1
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    5. XM_012068699.1 → XP_011924089.1  F-box only protein 38 isoform X1

      See identical proteins and their annotated locations for XP_011924089.1

      UniProtKB/TrEMBL
      A0A2K5KM55
      Related
      ENSCATP00000001781.1, ENSCATT00000008976.1
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.