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    LOC105375008 uncharacterized LOC105375008 [ Homo sapiens (human) ]

    Gene ID: 105375008, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105375008
    Gene description
    uncharacterized LOC105375008
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105375008 in Genome Data Viewer
    Location:
    6p22.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (29475699..29490181)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (29350356..29364838)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379641 Neighboring gene olfactory receptor family 2 subfamily H member 1 Neighboring gene ubiquitin D pseudogene 1 Neighboring gene MAS1L pseudogene 1 Neighboring gene uncharacterized LOC124901486 Neighboring gene MAS1 proto-oncogene like, G protein-coupled receptor Neighboring gene ribosomal protein S17 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 2829 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:29492704-29493211 Neighboring gene long intergenic non-protein coding RNA 1015

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      29475699..29490181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007059916.1 RNA Sequence

    2. XR_007059915.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_167244.2 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      741360..755843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068568.1 RNA Sequence

    2. XR_007068567.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      962151..976633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068747.1 RNA Sequence

    2. XR_007068746.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_3

    Genomic

    1. NT_167245.2 Reference GRCh38.p14 ALT_REF_LOCI_3

      Range
      741222..755704
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068816.1 RNA Sequence

    2. XR_007068815.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_4

    Genomic

    1. NT_167246.2 Reference GRCh38.p14 ALT_REF_LOCI_4

      Range
      740824..755307
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068839.1 RNA Sequence

    2. XR_007068838.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_5

    Genomic

    1. NT_167247.2 Reference GRCh38.p14 ALT_REF_LOCI_5

      Range
      741073..755555
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068857.1 RNA Sequence

    2. XR_007068856.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_6

    Genomic

    1. NT_167248.2 Reference GRCh38.p14 ALT_REF_LOCI_6

      Range
      741165..755648
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068870.1 RNA Sequence

    2. XR_007068869.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_7

    Genomic

    1. NT_167249.2 Reference GRCh38.p14 ALT_REF_LOCI_7

      Range
      784710..799192
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068887.1 RNA Sequence

    2. XR_007068886.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      29350356..29364838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007076689.1 RNA Sequence

    2. XR_007076688.1 RNA Sequence

    Nucleotide Protein
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