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    LOC105373299 uncharacterized LOC105373299 [ Homo sapiens (human) ]

    Gene ID: 105373299, updated on 22-Oct-2024

    Summary

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    Gene symbol
    LOC105373299
    Gene description
    uncharacterized LOC105373299
    See related
    Ensembl:ENSG00000286794
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in brain (RPKM 3.7), testis (RPKM 2.1) and 3 other tissues See more
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    Genomic context

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    See LOC105373299 in Genome Data Viewer
    Location:
    Xq22.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (102141728..102143965)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (100586312..100588555)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MT-ND6 pseudogene 13 Neighboring gene transcription elongation factor A like 2 Neighboring gene transcription elongation factor A like 6 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29813 Neighboring gene brain expressed X-linked 5 Neighboring gene t-complex 11 family, X-linked 3, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      102141728..102143965
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068283.1 RNA Sequence

      Related
      ENST00000828775.1

    2. XR_007068282.1 RNA Sequence

      Related
      ENST00000828779.1

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791816.1 Reference GRCh38.p14 PATCHES

      Range
      36818..39061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_938472.4 RNA Sequence

    2. XR_938471.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      100586312..100588555
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007090954.1 RNA Sequence

    2. XR_007090953.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials