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    LOC105370370 uncharacterized LOC105370370 [ Homo sapiens (human) ]

    Gene ID: 105370370, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105370370
    Gene description
    uncharacterized LOC105370370
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370370 in Genome Data Viewer
    Location:
    13q34
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (112180489..112195688, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (111424551..111439725, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene SOX1 overlapping transcript Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:112760473-112761092 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112761713-112762331 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:112766326-112767525 Neighboring gene long intergenic non-protein coding RNA 404 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:112805199-112805774 Neighboring gene uncharacterized LOC100506016 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112813701-112814406 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112814407-112815111 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:112817596-112818292 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:112818293-112818987 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112826532-112827032 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112827033-112827533 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:112837781-112838980 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:112843656-112844855 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112853773-112854272 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112856695-112857488 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112857489-112858280 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112859075-112859866 Neighboring gene uncharacterized LOC124903249 Neighboring gene long intergenic non-protein coding RNA 1070 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112865406-112866297

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      112180489..112195688 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_944288.1 RNA Sequence

    2. XR_944284.1 RNA Sequence

    3. XR_944287.1 RNA Sequence

    4. XR_944283.1 RNA Sequence

    5. XR_944285.1 RNA Sequence

    6. XR_944282.1 RNA Sequence

    7. XR_944286.1 RNA Sequence

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187592.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      11..12814 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_951832.2 RNA Sequence

    2. XR_951830.1 RNA Sequence

    3. XR_951835.1 RNA Sequence

    4. XR_951829.1 RNA Sequence

    5. XR_951831.1 RNA Sequence

    6. XR_951833.2 RNA Sequence

    7. XR_951834.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      111424551..111439725 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007084149.1 RNA Sequence

    2. XR_007084147.1 RNA Sequence

    3. XR_007084150.1 RNA Sequence

    4. XR_007084145.1 RNA Sequence

    5. XR_007084146.1 RNA Sequence

    6. XR_007084144.1 RNA Sequence

    7. XR_007084148.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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