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    SNF4Agamma SNF4/AMP-activated protein kinase gamma subunit [ Solenopsis invicta (red fire ant) ]

    Gene ID: 105205044, updated on 10-Oct-2024

    Summary

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    Gene symbol
    SNF4Agamma
    Gene description
    SNF4/AMP-activated protein kinase gamma subunit
    Locus tag
    SINV_01683
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solenopsis invicta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See SNF4Agamma in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    104 current UNIL_Sinv_3.0 (GCF_016802725.1) 3 NC_052666.1 (28069257..28140428)
    103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521557.1 (511802..584539)

    Chromosome 3 - NC_052666.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113005932 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene asparagine synthetase Neighboring gene lethal (2) k09848 Neighboring gene neurogenic locus notch homolog protein 1 Neighboring gene D-glucuronyl C5-epimerase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the fire ant Solenopsis invicta. Wurm Y, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282665, Free PMC Article
    2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    dentin sialophosphoprotein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UNIL_Sinv_3.0

    Genomic

    1. NC_052666.1 Reference UNIL_Sinv_3.0

      Range
      28069257..28140428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026133925.2 → XP_025989710.2  dentin sialophosphoprotein isoform X1

      Conserved Domains (2) summary
      cd04618
      Location:783 → 919
      CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
      cd04641
      Location:945 → 1068
      CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

    2. XM_026133929.2 → XP_025989714.2  dentin sialophosphoprotein isoform X2

      Conserved Domains (2) summary
      cd04618
      Location:778 → 914
      CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
      cd04641
      Location:940 → 1063
      CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

    3. XM_026133928.2 → XP_025989713.2  dentin sialophosphoprotein isoform X2

      Conserved Domains (2) summary
      cd04618
      Location:778 → 914
      CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
      cd04641
      Location:940 → 1063
      CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

    4. XM_026133927.2 → XP_025989712.2  dentin sialophosphoprotein isoform X2

      Conserved Domains (2) summary
      cd04618
      Location:778 → 914
      CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
      cd04641
      Location:940 → 1063
      CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

    5. XM_026133930.2 → XP_025989715.2  dentin sialophosphoprotein isoform X2

      Conserved Domains (2) summary
      cd04618
      Location:778 → 914
      CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
      cd04641
      Location:940 → 1063
      CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase

    6. XM_026133926.2 → XP_025989711.2  dentin sialophosphoprotein isoform X2

      Conserved Domains (2) summary
      cd04618
      Location:778 → 914
      CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
      cd04641
      Location:940 → 1063
      CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase
    Nucleotide Protein
    Heading Accession and Version

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