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    Pban PBAN-type neuropeptides-like [ Solenopsis invicta (red fire ant) ]

    Gene ID: 105195396, updated on 5-Oct-2024

    Summary

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    Gene symbol
    Pban
    Gene description
    PBAN-type neuropeptides-like
    Locus tag
    SINV_07018
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Solenopsis invicta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
    Orthologs
    honey bee all
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    Genomic context

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    See Pban in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UNIL_Sinv_3.0 (GCF_016802725.1) 14 NC_052677.1 (7563141..7576305, complement)
    103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020522081.1 (65820..78983)

    Chromosome 14 - NC_052677.1Genomic Context describing neighboring genes Neighboring gene ralA-binding protein 1-A Neighboring gene uncharacterized LOC113006259 Neighboring gene uncharacterized LOC120359506 Neighboring gene uncharacterized LOC113002646

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of a new member of the PBAN family of neuropeptides from the fire ant, Solenopsis invicta. Choi MY, et al. Insect Mol Biol, 2009 Apr. PMID 19320757
    2. The genome of the fire ant Solenopsis invicta. Wurm Y, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282665, Free PMC Article
    3. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    PBAN-type neuropeptides
    Names
    pheromone biosynthesis activating neuropeptide

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001304598.1 → NP_001291527.1  PBAN-type neuropeptides precursor

      See identical proteins and their annotated locations for NP_001291527.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ223176
      UniProtKB/TrEMBL
      C3TWQ8
      Conserved Domains (1) summary
      pfam05874
      Location:52 → 158
      PBAN; Pheromone biosynthesis activating neuropeptide (PBAN)

    RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UNIL_Sinv_3.0

    Genomic

    1. NC_052677.1 Reference UNIL_Sinv_3.0

      Range
      7563141..7576305 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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