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    eva1c eva-1 homolog C (C. elegans) [ Notothenia coriiceps (black rockcod) ]

    Gene ID: 104955710, updated on 12-Mar-2024

    Summary

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    Gene symbol
    eva1c
    Gene description
    eva-1 homolog C (C. elegans)
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Notothenia coriiceps
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Notothenia
    Orthologs
    human zebrafish all
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    Genomic context

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    See eva1c in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current NC01 (GCF_000735185.1) Unplaced Scaffold NW_011357369.1 (4942759..4948254, complement)

    NW_011357369.1Genomic Context describing neighboring genes Neighboring gene kinase suppressor of Ras 1-like Neighboring gene leucine rich repeat containing 8 VRAC subunit Db Neighboring gene leucine rich repeat containing 8 VRAC subunit C Neighboring gene HAUS augmin-like complex, subunit 1 Neighboring gene MIS18 kinetochore protein A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011357369.1 Unplaced Scaffold Reference NC01 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein eva-1 homolog C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Notothenia coriiceps Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NC01 Primary Assembly

    Genomic

    1. NW_011357369.1 Reference NC01 Primary Assembly

      Range
      4942759..4948254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010783098.1 → XP_010781400.1  protein eva-1 homolog C

      UniProtKB/TrEMBL
      A0A6I9P1T2
      Conserved Domains (1) summary
      pfam02140
      Location:52 → 136
      Gal_Lectin; Galactose binding lectin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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