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    LOC104879148 uncharacterized LOC104879148 [ Vitis vinifera (wine grape) ]

    Gene ID: 104879148, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC104879148
    Gene description
    uncharacterized LOC104879148
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC104879148 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 4 NC_081808.1 (17724444..17730032)
    102 previous assembly 12X (GCF_000003745.3) 4 NC_012010.3 (16253351..16258935)

    Chromosome 4 - NC_081808.1Genomic Context describing neighboring genes Neighboring gene ALBINO3-like protein 2, chloroplastic Neighboring gene flavin mononucleotide hydrolase 1, chloroplatic Neighboring gene retrovirus-related Pol polyprotein from transposon RE1 Neighboring gene uncharacterized LOC104879147 Neighboring gene uncharacterized LOC104879146

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC104879148
    Names
    R3H domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081808.1 Reference ASM3070453v1 Primary Assembly

      Range
      17724444..17730032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010650958.3 → XP_010649260.1  uncharacterized protein LOC104879148 isoform X1

      See identical proteins and their annotated locations for XP_010649260.1

      UniProtKB/TrEMBL
      A5B332, D7SPT5
      Conserved Domains (2) summary
      cd02642
      Location:22 → 87
      R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
      pfam12752
      Location:108 → 156
      SUZ; SUZ domain

    2. XM_019219663.2 → XP_019075208.1  uncharacterized protein LOC104879148 isoform X2

      UniProtKB/TrEMBL
      A5B332

    3. XM_019219664.2 → XP_019075209.1  uncharacterized protein LOC104879148 isoform X3

      UniProtKB/TrEMBL
      A5B332
    Nucleotide Protein
    Heading Accession and Version

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