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    LOC104128918 ankyrin repeat and SOCS box protein 8 [ Egretta garzetta (little egret) ]

    Gene ID: 104128918, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC104128918
    Gene description
    ankyrin repeat and SOCS box protein 8
    Locus tag
    Z169_02723
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Egretta garzetta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
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    Genomic context

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    See LOC104128918 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260175.1 (167720..169306)

    NW_009260175.1Genomic Context describing neighboring genes Neighboring gene inhibin beta C chain-like Neighboring gene GLI family zinc finger 1 Neighboring gene ATP-dependent 6-phosphofructokinase, muscle type-like Neighboring gene ankyrin repeat and SOCS box containing 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009260175 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM68718v1 Primary Assembly

    Genomic

    1. NW_009260175.1 Reference ASM68718v1 Primary Assembly

      Range
      167720..169306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009641774.2 → XP_009640069.1  ankyrin repeat and SOCS box protein 8

      UniProtKB/TrEMBL
      A0A091JBT1
      Conserved Domains (5) summary
      cd00204
      Location:7 → 122
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd03727
      Location:196 → 238
      SOCS_ASB8; SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The ...
      pfam12796
      Location:8 → 99
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:88 → 139
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:7 → 34
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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