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    TGFBI transforming growth factor beta induced [ Egretta garzetta (little egret) ]

    Gene ID: 104128901, updated on 3-Aug-2024

    Summary

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    Gene symbol
    TGFBI
    Gene description
    transforming growth factor beta induced
    Locus tag
    Z169_02234
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Egretta garzetta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
    Orthologs
    human mouse all
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    Genomic context

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    See TGFBI in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260173.1 (492604..546919)

    NW_009260173.1Genomic Context describing neighboring genes Neighboring gene myeloid protein 1-like Neighboring gene leukocyte cell-derived chemotaxin-2-like Neighboring gene SMAD family member 5 Neighboring gene small integral membrane protein 32

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009260173 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transforming growth factor-beta-induced protein ig-h3
    Names
    Transforming growth factor-beta-induced protein ig-h3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM68718v1 Primary Assembly

    Genomic

    1. NW_009260173.1 Reference ASM68718v1 Primary Assembly

      Range
      492604..546919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009641756.2 → XP_009640051.1  transforming growth factor-beta-induced protein ig-h3

      UniProtKB/TrEMBL
      A0A091JBR3
      Conserved Domains (1) summary
      pfam02469
      Location:487 → 608
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version

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