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    ANKIB1 ankyrin repeat and IBR domain containing 1 [ Equus przewalskii (Przewalski's horse) ]

    Gene ID: 103549186, updated on 11-Mar-2024

    Summary

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    Gene symbol
    ANKIB1
    Gene description
    ankyrin repeat and IBR domain containing 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus przewalskii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See ANKIB1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current Burgud (GCF_000696695.1) Unplaced Scaffold NW_007673378.1 (427408..560621)

    NW_007673378.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeats and death domain containing 1 Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene uncharacterized LOC103549188 Neighboring gene protein lifeguard 1-like Neighboring gene GATA zinc finger domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_007673378 unplaced scaffold reference Burgud Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and IBR domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus przewalskii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Burgud Primary Assembly

    Genomic

    1. NW_007673378.1 Reference Burgud Primary Assembly

      Range
      427408..560621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008517348.1 → XP_008515570.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_008515570.1

      Conserved Domains (4) summary
      cd00204
      Location:47 → 195
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:47 → 77
      ANK; ANK repeat [structural motif]
      pfam01485
      Location:403 → 476
      IBR; IBR domain, a half RING-finger domain
      cd16774
      Location:333 → 389
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

    2. XM_008517346.1 → XP_008515568.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_008515568.1

      Conserved Domains (4) summary
      cd00204
      Location:47 → 195
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:47 → 77
      ANK; ANK repeat [structural motif]
      pfam01485
      Location:403 → 476
      IBR; IBR domain, a half RING-finger domain
      cd16774
      Location:333 → 389
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

    3. XM_008517351.1 → XP_008515573.1  ankyrin repeat and IBR domain-containing protein 1 isoform X2

      See identical proteins and their annotated locations for XP_008515573.1

      Conserved Domains (4) summary
      cd00204
      Location:47 → 195
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:47 → 77
      ANK; ANK repeat [structural motif]
      pfam01485
      Location:403 → 476
      IBR; IBR domain, a half RING-finger domain
      cd16774
      Location:333 → 389
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

    4. XM_008517350.1 → XP_008515572.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_008515572.1

      Conserved Domains (4) summary
      cd00204
      Location:47 → 195
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:47 → 77
      ANK; ANK repeat [structural motif]
      pfam01485
      Location:403 → 476
      IBR; IBR domain, a half RING-finger domain
      cd16774
      Location:333 → 389
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

    5. XM_008517349.1 → XP_008515571.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_008515571.1

      Conserved Domains (4) summary
      cd00204
      Location:47 → 195
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:47 → 77
      ANK; ANK repeat [structural motif]
      pfam01485
      Location:403 → 476
      IBR; IBR domain, a half RING-finger domain
      cd16774
      Location:333 → 389
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

    6. XM_008517347.1 → XP_008515569.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_008515569.1

      Conserved Domains (4) summary
      cd00204
      Location:47 → 195
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:47 → 77
      ANK; ANK repeat [structural motif]
      pfam01485
      Location:403 → 476
      IBR; IBR domain, a half RING-finger domain
      cd16774
      Location:333 → 389
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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