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    AVPR1A arginine vasopressin receptor 1A [ Orycteropus afer afer ]

    Gene ID: 103198562, updated on 11-Mar-2024

    Summary

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    Gene symbol
    AVPR1A
    Gene description
    arginine vasopressin receptor 1A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Orycteropus afer afer (sub-species: afer)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
    Orthologs
    human mouse all
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    Genomic context

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    See AVPR1A in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921684.1 (4651265..4654841, complement)

    NW_006921684.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1H Neighboring gene protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like Neighboring gene ribitol xylosyltransferase 1 Neighboring gene SLIT-ROBO Rho GTPase activating protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006921684 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables vasopressin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of systemic arterial blood pressure by vasopressin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vasopressin V1a receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OryAfe1.0 Primary Assembly

    Genomic

    1. NW_006921684.1 Reference OryAfe1.0 Primary Assembly

      Range
      4651265..4654841 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007942727.2 → XP_007940918.1  vasopressin V1a receptor

      UniProtKB/TrEMBL
      A0A8B6ZYY8
      Conserved Domains (2) summary
      pfam00001
      Location:68 → 348
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam08983
      Location:372 → 418
      DUF1856; Domain of unknown function (DUF1856)
    Nucleotide Protein
    Heading Accession and Version

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