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    APBB2 amyloid beta precursor protein binding family B member 2 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102939806, updated on 10-Mar-2024

    Summary

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    Gene symbol
    APBB2
    Gene description
    amyloid beta precursor protein binding family B member 2
    Locus tag
    UY3_13315
    See related
    EnsemblRapid:ENSCMYG00015015109
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
    human mouse all
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    Genomic context

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    See APBB2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 4 NC_057852.1 (96382356..96710789)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 4 NC_051244.1 (96382427..96707679)

    Chromosome 4 - NC_057852.1Genomic Context describing neighboring genes Neighboring gene LIM and calponin homology domains 1 Neighboring gene ubiquitin C-terminal hydrolase L1 Neighboring gene uncharacterized LOC122465355 Neighboring gene uncharacterized LOC122465356 Neighboring gene NOP2/Sun RNA methyltransferase family member 7 Neighboring gene uncharacterized LOC122465598

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables amyloid-beta binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amyloid-beta A4 precursor protein-binding family B member 2
    Names
    Amyloid beta A4 precursor protein-binding family B member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_057852.1 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      96382356..96710789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037897880.2 → XP_037753808.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X3

      Conserved Domains (3) summary
      cd01271
      Location:592 → 718
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:425 → 564
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    2. XM_037897878.2 → XP_037753806.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X1

      Conserved Domains (3) summary
      cd01271
      Location:593 → 719
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:425 → 564
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    3. XM_043544465.1 → XP_043400400.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X1

      Conserved Domains (3) summary
      cd01271
      Location:593 → 719
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:425 → 564
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    4. XM_037897877.2 → XP_037753805.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X1

      Conserved Domains (3) summary
      cd01271
      Location:593 → 719
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:425 → 564
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    5. XM_037897879.2 → XP_037753807.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X2

      Conserved Domains (3) summary
      cd01271
      Location:592 → 718
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:424 → 563
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:300 → 328
      WW; WW domain

    6. XM_043544467.1 → XP_043400402.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X6

      Conserved Domains (3) summary
      cd01271
      Location:584 → 710
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:416 → 555
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:292 → 320
      WW; WW domain

    7. XM_037897881.2 → XP_037753809.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X4

      Conserved Domains (3) summary
      cd01271
      Location:591 → 717
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:425 → 562
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    8. XM_037897882.2 → XP_037753810.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X5

      Conserved Domains (3) summary
      cd01271
      Location:590 → 716
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:424 → 561
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:300 → 328
      WW; WW domain

    9. XM_037897887.2 → XP_037753815.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X11

      Conserved Domains (3) summary
      cd01271
      Location:568 → 694
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:403 → 540
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:300 → 328
      WW; WW domain

    10. XM_043544470.1 → XP_043400405.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X7

      Conserved Domains (3) summary
      smart00456
      Location:290 → 321
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:581 → 707
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:415 → 552
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    11. XM_037897884.2 → XP_037753812.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X8

      Conserved Domains (3) summary
      cd01271
      Location:572 → 698
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:404 → 543
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    12. XM_043544471.1 → XP_043400406.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X9

      Related
      ENSCMYP00015023143.1, ENSCMYT00015028403.1
      Conserved Domains (3) summary
      cd01271
      Location:570 → 696
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:404 → 541
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    13. XM_043544473.1 → XP_043400408.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X10

      Conserved Domains (3) summary
      cd01271
      Location:569 → 695
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:403 → 540
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:300 → 328
      WW; WW domain

    14. XM_037897885.2 → XP_037753813.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X9

      Conserved Domains (3) summary
      cd01271
      Location:570 → 696
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:404 → 541
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    15. XM_037897886.2 → XP_037753814.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X10

      Conserved Domains (3) summary
      cd01271
      Location:569 → 695
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:403 → 540
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:300 → 328
      WW; WW domain

    16. XM_043544475.1 → XP_043400410.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X12

      Conserved Domains (3) summary
      smart00456
      Location:291 → 322
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:561 → 687
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:395 → 532
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    17. XM_043544476.1 → XP_043400411.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X13

      Conserved Domains (3) summary
      smart00456
      Location:290 → 321
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:560 → 686
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:394 → 531
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    18. XM_043544464.1 → XP_043400399.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X1

      Conserved Domains (3) summary
      cd01271
      Location:593 → 719
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:425 → 564
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:301 → 329
      WW; WW domain

    19. XM_043544468.1 → XP_043400403.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X6

      Conserved Domains (3) summary
      cd01271
      Location:584 → 710
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:416 → 555
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:292 → 320
      WW; WW domain

    20. XM_037897883.2 → XP_037753811.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X6

      Conserved Domains (3) summary
      cd01271
      Location:584 → 710
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:416 → 555
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:292 → 320
      WW; WW domain

    21. XM_043544477.1 → XP_043400412.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X14

      Conserved Domains (3) summary
      smart00456
      Location:273 → 304
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:543 → 669
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:377 → 514
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    22. XM_043544474.1 → XP_043400409.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X12

      Related
      ENSCMYP00015023135.1, ENSCMYT00015028392.1
      Conserved Domains (3) summary
      smart00456
      Location:291 → 322
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:561 → 687
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:395 → 532
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    23. XM_043544469.1 → XP_043400404.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X7

      Related
      ENSCMYP00015023149.1, ENSCMYT00015028409.1
      Conserved Domains (3) summary
      smart00456
      Location:290 → 321
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:581 → 707
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:415 → 552
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    24. XM_037897888.2 → XP_037753816.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X15

      Conserved Domains (3) summary
      cd01271
      Location:328 → 454
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:160 → 299
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:36 → 64
      WW; WW domain

    25. XM_037897889.2 → XP_037753817.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X16

      Conserved Domains (3) summary
      cd01271
      Location:327 → 453
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:159 → 298
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
      pfam00397
      Location:35 → 63
      WW; WW domain

    26. XM_043544478.1 → XP_043400413.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X17

      Conserved Domains (3) summary
      smart00456
      Location:34 → 65
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:325 → 451
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:159 → 296
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    27. XM_043544479.1 → XP_043400414.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X18

      Conserved Domains (3) summary
      smart00456
      Location:35 → 66
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:305 → 431
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:139 → 276
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    28. XM_043544480.1 → XP_043400415.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X19

      Conserved Domains (3) summary
      smart00456
      Location:34 → 65
      WW; Domain with 2 conserved Trp (W) residues
      cd01271
      Location:304 → 430
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cd01272
      Location:138 → 275
      PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain

    29. XM_037897890.2 → XP_037753818.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X21

      UniProtKB/TrEMBL
      M7AXR6
      Conserved Domains (1) summary
      cd01271
      Location:34 → 160
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain

    30. XM_043544481.1 → XP_043400416.1  amyloid-beta A4 precursor protein-binding family B member 2 isoform X20

      Conserved Domains (2) summary
      cd01271
      Location:77 → 203
      PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
      cl17171
      Location:4 → 48
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
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