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    TTLL1 TTL family tubulin polyglutamylase complex subunit L1 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102936953, updated on 10-Mar-2024

    Summary

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    Gene symbol
    TTLL1
    Gene description
    TTL family tubulin polyglutamylase complex subunit L1
    Locus tag
    UY3_08868
    See related
    EnsemblRapid:ENSCMYG00015014683
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
    human mouse all
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    Genomic context

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    See TTLL1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (227355742..227392691)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (227355753..227396750)

    Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102936721 Neighboring gene malonyl-CoA-acyl carrier protein transacylase Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene ARF GTPase activating protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tubulin-glutamic acid ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyglutamylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable tubulin polyglutamylase TTLL1
    Names
    Putative tubulin polyglutamylase TTLL1
    tubulin tyrosine ligase like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      227355742..227392691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037914986.2 → XP_037770914.1  probable tubulin polyglutamylase TTLL1 isoform X3

      Conserved Domains (1) summary
      pfam03133
      Location:70 → 339
      TTL; Tubulin-tyrosine ligase family

    2. XM_037914996.2 → XP_037770924.1  probable tubulin polyglutamylase TTLL1 isoform X4

      Conserved Domains (1) summary
      pfam03133
      Location:70 → 330
      TTL; Tubulin-tyrosine ligase family

    3. XM_037914983.2 → XP_037770911.1  probable tubulin polyglutamylase TTLL1 isoform X1

      Related
      ENSCMYP00015022665.1, ENSCMYT00015027629.1
      Conserved Domains (1) summary
      pfam03133
      Location:70 → 375
      TTL; Tubulin-tyrosine ligase family

    4. XM_037914984.2 → XP_037770912.1  probable tubulin polyglutamylase TTLL1 isoform X1

      Related
      ENSCMYP00015022663.1, ENSCMYT00015027627.1
      Conserved Domains (1) summary
      pfam03133
      Location:70 → 375
      TTL; Tubulin-tyrosine ligase family

    5. XM_037914985.2 → XP_037770913.1  probable tubulin polyglutamylase TTLL1 isoform X2

      Related
      ENSCMYP00015022657.1, ENSCMYT00015027621.1
      Conserved Domains (1) summary
      pfam03133
      Location:59 → 364
      TTL; Tubulin-tyrosine ligase family

    6. XM_037915028.2 → XP_037770956.1  probable tubulin polyglutamylase TTLL1 isoform X5

      Conserved Domains (1) summary
      pfam03133
      Location:21 → 326
      TTL; Tubulin-tyrosine ligase family

    7. XM_037915018.2 → XP_037770946.1  probable tubulin polyglutamylase TTLL1 isoform X5

      Conserved Domains (1) summary
      pfam03133
      Location:21 → 326
      TTL; Tubulin-tyrosine ligase family

    8. XM_037915007.2 → XP_037770935.1  probable tubulin polyglutamylase TTLL1 isoform X5

      Related
      ENSCMYP00015022649.1, ENSCMYT00015027609.1
      Conserved Domains (1) summary
      pfam03133
      Location:21 → 326
      TTL; Tubulin-tyrosine ligase family
    Nucleotide Protein
    Heading Accession and Version

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