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    Gspt1 G1 to S phase transition 1 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

    Gene ID: 102923099, updated on 10-Mar-2024

    Summary

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    Gene symbol
    Gspt1
    Gene description
    G1 to S phase transition 1
    See related
    Ensembl:ENSPEMG00000012896
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Peromyscus maniculatus bairdii (sub-species: bairdii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
    Orthologs
    human mouse all
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    Genomic context

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    See Gspt1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    102 current HU_Pman_2.1.3 (GCF_003704035.1) 8 NC_056015.1 (3406050..3445234)
    101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501248.1 (3366285..3405092)

    Chromosome 8 - NC_056015.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 29 Neighboring gene uncharacterized LOC121831697 Neighboring gene TNF receptor superfamily member 17 Neighboring gene tubulin alpha-1C chain-like Neighboring gene ribosomal L1 domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation release factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of translation release factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic peptide chain release factor GTP-binding subunit ERF3A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HU_Pman_2.1.3 Primary Assembly

    Genomic

    1. NC_056015.1 Reference HU_Pman_2.1.3 Primary Assembly

      Range
      3406050..3445234
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006983896.3 → XP_006983958.1  eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X2

      UniProtKB/TrEMBL
      A0A6I9LHM1
      Conserved Domains (3) summary
      PHA03307
      Location:21 → 208
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5256
      Location:205 → 629
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam07145
      Location:60 → 76
      PAM2; Ataxin-2 C-terminal region

    2. XM_006983895.3 → XP_006983957.1  eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1

      UniProtKB/TrEMBL
      A0A6I9LSV0
      Related
      ENSPEMP00000012626.1
      Conserved Domains (2) summary
      COG5256
      Location:206 → 630
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam07145
      Location:60 → 76
      PAM2; Ataxin-2 C-terminal region
    Nucleotide Protein
    Heading Accession and Version

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