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    TERF1 telomeric repeat binding factor 1 [ Myotis davidii ]

    Gene ID: 102759483, updated on 30-Mar-2024

    Summary

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    Gene symbol
    TERF1
    Gene description
    telomeric repeat binding factor 1
    Locus tag
    MDA_GLEAN10021988
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis davidii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
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    Genomic context

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    See TERF1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006293700.1 (3020882..3055963)

    NW_006293700.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily A member 1 Neighboring gene potassium voltage-gated channel subfamily B member 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene somatomedin B and thrombospondin type 1 domain containing Neighboring gene chromosome unknown C8orf89 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006293700.1 Unplaced Scaffold Reference ASM32734v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables telomeric DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome, telomeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    telomeric repeat-binding factor 1
    Names
    Telomeric repeat-binding factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM32734v1

    Genomic

    1. NW_006293700.1 Reference ASM32734v1

      Range
      3020882..3055963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015566257.1 → XP_015421743.1  telomeric repeat-binding factor 1 isoform X1

      Conserved Domains (3) summary
      smart00717
      Location:299 → 348
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd11660
      Location:300 → 348
      SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
      cl02779
      Location:1 → 187
      TRFH; Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, ...

    2. XM_015566258.1 → XP_015421744.1  telomeric repeat-binding factor 1 isoform X2

      Conserved Domains (1) summary
      cl02779
      Location:1 → 187
      TRFH; Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, ...

    3. XM_015566259.1 → XP_015421745.1  telomeric repeat-binding factor 1 isoform X3

      Conserved Domains (1) summary
      cl02779
      Location:1 → 187
      TRFH; Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, ...

    4. XM_015566260.1 → XP_015421746.1  telomeric repeat-binding factor 1 isoform X4

      Conserved Domains (1) summary
      cl02779
      Location:1 → 181
      TRFH; Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, ...
    Nucleotide Protein
    Heading Accession and Version

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