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    LOC102598260 serine/threonine-protein phosphatase 7 long form homolog [ Solanum tuberosum (potato) ]

    Gene ID: 102598260, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC102598260
    Gene description
    serine/threonine-protein phosphatase 7 long form homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum tuberosum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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    Genomic context

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    See LOC102598260 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238992.1 (1148011..1152504)

    NW_006238992.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 CYP736A12-like Neighboring gene uncharacterized protein PFB0765w-like Neighboring gene uncharacterized LOC107060213 Neighboring gene protein STRICTOSIDINE SYNTHASE-LIKE 12-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006238992.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in meristem development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meristem maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein phosphatase 7 long form homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SolTub_3.0 Primary Assembly

    Genomic

    1. NW_006238992.1 Reference SolTub_3.0 Primary Assembly

      Range
      1148011..1152504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015307822.1 → XP_015163308.1  serine/threonine-protein phosphatase 7 long form homolog

      UniProtKB/TrEMBL
      M0ZJ12, M0ZJ13
      Conserved Domains (1) summary
      pfam10536
      Location:71 → 442
      PMD; Plant mobile domain

    2. XM_015307823.1 → XP_015163309.1  serine/threonine-protein phosphatase 7 long form homolog

      UniProtKB/TrEMBL
      M0ZJ12, M0ZJ13
      Conserved Domains (1) summary
      pfam10536
      Location:71 → 442
      PMD; Plant mobile domain

    3. XM_015307821.1 → XP_015163307.1  serine/threonine-protein phosphatase 7 long form homolog

      UniProtKB/TrEMBL
      M0ZJ12, M0ZJ13
      Conserved Domains (1) summary
      pfam10536
      Location:71 → 442
      PMD; Plant mobile domain

    4. XM_015307824.1 → XP_015163310.1  serine/threonine-protein phosphatase 7 long form homolog

      UniProtKB/TrEMBL
      M0ZJ12, M0ZJ13
      Conserved Domains (1) summary
      pfam10536
      Location:71 → 442
      PMD; Plant mobile domain
    Nucleotide Protein
    Heading Accession and Version

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