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    LOC102588858 VAN3-binding protein [ Solanum tuberosum (potato) ]

    Gene ID: 102588858, updated on 6-Nov-2021

    Summary

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    Gene symbol
    LOC102588858
    Gene description
    VAN3-binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum tuberosum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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    Genomic context

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    See LOC102588858 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238973.1 (711160..714973, complement)

    NW_006238973.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102588202 Neighboring gene GPI mannosyltransferase 3 Neighboring gene uncharacterized LOC102583265 Neighboring gene protein ECERIFERUM 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006238973.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    VAN3-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SolTub_3.0 Primary Assembly

    Genomic

    1. NW_006238973.1 Reference SolTub_3.0 Primary Assembly

      Range
      711160..714973 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006343501.2 → XP_006343563.1  VAN3-binding protein

      UniProtKB/TrEMBL
      M1AS45
      Conserved Domains (2) summary
      pfam05703
      Location:15 → 256
      Auxin_canalis; Auxin canalisation
      pfam08458
      Location:283 → 377
      PH_2; Plant pleckstrin homology-like region
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases