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    UBASH3A ubiquitin associated and SH3 domain containing A [ Alligator mississippiensis (American alligator) ]

    Gene ID: 102568304, updated on 8-May-2024

    Summary

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    Gene symbol
    UBASH3A
    Gene description
    ubiquitin associated and SH3 domain containing A
    Locus tag
    Y1Q_0000076
    See related
    EnsemblRapid:ENSAMIG00015008791
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Orthologs
    human mouse all
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    Genomic context

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    See UBASH3A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (299426987..299462439)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709793.1 (297880..333258)

    Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene trefoil factor 3 Neighboring gene transmembrane serine protease 3 Neighboring gene radial spoke head component 1 Neighboring gene solute carrier family 37 member 1 Neighboring gene syncytin-A-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of T cell receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-associated and SH3 domain-containing protein A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081824.1 Reference rAllMis1 Primary Assembly

      Range
      299426987..299462439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019487181.2 → XP_019342726.1  ubiquitin-associated and SH3 domain-containing protein A

      Related
      ENSAMIP00015010615.1, ENSAMIT00015015753.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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