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    ELP6 elongator acetyltransferase complex subunit 6 [ Tupaia chinensis (Chinese tree shrew) ]

    Gene ID: 102480874, updated on 10-Mar-2024

    Summary

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    Gene symbol
    ELP6
    Gene description
    elongator acetyltransferase complex subunit 6
    Locus tag
    TREES_T100002377
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tupaia chinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See ELP6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006209032.1 (2286649..2303523, complement)

    NW_006209032.1Genomic Context describing neighboring genes Neighboring gene SREBF chaperone Neighboring gene uncharacterized LOC114006616 Neighboring gene uncharacterized LOC106734149 Neighboring gene chondroitin sulfate proteoglycan 5 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit C1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006209032 Unplaced Scaffold Reference TupChi_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of elongator holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongator complex protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TupChi_1.0

    Genomic

    1. NW_006209032.1 Reference TupChi_1.0

      Range
      2286649..2303523 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027769302.1 → XP_027625103.1  elongator complex protein 6

      UniProtKB/TrEMBL
      L8Y411
    Nucleotide Protein
    Heading Accession and Version

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