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    RBM12BB RNA binding motif protein 12Bb [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102363704, updated on 2-May-2024

    Summary

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    Gene symbol
    RBM12BB
    Gene description
    RNA binding motif protein 12Bb
    See related
    Ensembl:ENSLACG00000007177
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    RBM12B; RBM12BA
    Orthologs
    human zebrafish all
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    Genomic context

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    See RBM12BB in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 2 NC_088140.1 (332931346..332946135, complement)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005820774.1 (251505..266252)

    Chromosome 2 - NC_088140.1Genomic Context describing neighboring genes Neighboring gene triple QxxK/R motif containing Neighboring gene CBY1 interacting BAR domain containing 1 Neighboring gene transmembrane protein 67 Neighboring gene cadherin 17, LI cadherin (liver-intestine)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA binding motif protein 12Bb
    Names
    RNA binding motif protein 12B
    RNA binding motif protein 12Ba

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088140.1 Reference fLatCha1.pri

      Range
      332931346..332946135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006008388.1 → XP_006008450.1  RNA binding motif protein 12Bb

      See identical proteins and their annotated locations for XP_006008450.1

      UniProtKB/TrEMBL
      H3AEN6
      Related
      ENSLACP00000008107.1, ENSLACT00000008173.1
      Conserved Domains (2) summary
      COG0724
      Location:269 → 455
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl17169
      Location:1 → 91
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_006008386.2 → XP_006008448.1  RNA binding motif protein 12Bb

      See identical proteins and their annotated locations for XP_006008448.1

      UniProtKB/TrEMBL
      H3AEN6
      Conserved Domains (2) summary
      COG0724
      Location:269 → 455
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl17169
      Location:1 → 91
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_006008385.2 → XP_006008447.1  RNA binding motif protein 12Bb

      See identical proteins and their annotated locations for XP_006008447.1

      UniProtKB/TrEMBL
      H3AEN6
      Conserved Domains (2) summary
      COG0724
      Location:269 → 455
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl17169
      Location:1 → 91
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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