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    DAG1 dystroglycan 1 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102146250, updated on 3-Dec-2024

    Summary

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    Gene symbol
    DAG1
    Gene description
    dystroglycan 1
    See related
    Ensembl:ENSMFAG00000044374
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DAG1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 2 NC_088376.1 (112478575..112553667)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 2 NC_052256.1 (90468886..90544171, complement)

    Chromosome 2 - NC_088376.1Genomic Context describing neighboring genes Neighboring gene T cell leukemia translocation altered Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene aminomethyltransferase Neighboring gene uncharacterized LOC123571720 Neighboring gene uncharacterized LOC135969721 Neighboring gene bassoon presynaptic cytomatrix protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables laminin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in morphogenesis of an epithelium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle attachment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nerve development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of dystroglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of dystrophin-associated glycoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dystroglycan 1
    Names
    dystroglycan 1 (dystrophin-associated glycoprotein 1)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088376.1 Reference T2T-MFA8v1.0

      Range
      112478575..112553667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045386268.2 → XP_045242203.1  dystroglycan 1 isoform X1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    2. XM_045386266.2 → XP_045242201.1  dystroglycan 1 isoform X1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    3. XM_005547122.4 → XP_005547179.1  dystroglycan 1 isoform X1

      See identical proteins and their annotated locations for XP_005547179.1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    4. XM_065540580.1 → XP_065396652.1  dystroglycan 1 isoform X2

      UniProtKB/TrEMBL
      A0A2K5VM36, G8F6J9

    5. XM_005547133.4 → XP_005547190.1  dystroglycan 1 isoform X2

      See identical proteins and their annotated locations for XP_005547190.1

      UniProtKB/TrEMBL
      A0A2K5VM36, G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    6. XM_005547132.4 → XP_005547189.1  dystroglycan 1 isoform X2

      See identical proteins and their annotated locations for XP_005547189.1

      UniProtKB/TrEMBL
      A0A2K5VM36, G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    7. XM_005547131.4 → XP_005547188.1  dystroglycan 1 isoform X2

      See identical proteins and their annotated locations for XP_005547188.1

      UniProtKB/TrEMBL
      A0A2K5VM36, G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    8. XM_015445908.3 → XP_015301394.1  dystroglycan 1 isoform X1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    9. XM_005547120.4 → XP_005547177.1  dystroglycan 1 isoform X1

      See identical proteins and their annotated locations for XP_005547177.1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    10. XM_005547119.4 → XP_005547176.1  dystroglycan 1 isoform X1

      See identical proteins and their annotated locations for XP_005547176.1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    11. XM_045386267.2 → XP_045242202.1  dystroglycan 1 isoform X1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    12. XM_005547127.4 → XP_005547184.1  dystroglycan 1 isoform X1

      See identical proteins and their annotated locations for XP_005547184.1

      UniProtKB/TrEMBL
      G8F6J9
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    13. XM_065540579.1 → XP_065396651.1  dystroglycan 1 isoform X1

      UniProtKB/TrEMBL
      G8F6J9
    Nucleotide Protein
    Heading Accession and Version

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