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    LOC101943325 cytochrome P450 19A1-like [ Chrysemys picta bellii (western painted turtle) ]

    Gene ID: 101943325, updated on 18-Nov-2024

    Summary

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    Gene symbol
    LOC101943325
    Gene description
    cytochrome P450 19A1-like
    See related
    Ensembl:ENSCPBG00000027849
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Chrysemys picta bellii (sub-species: bellii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
    Also known as
    aromatase
    Orthologs
    human mouse all
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    Genomic context

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    See LOC101943325 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 10 NC_088800.1 (22193885..22239052)
    103 previous assembly Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 9 NC_056657.1 (105360648..105405539, complement)

    Chromosome 10 - NC_088800.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135973920 Neighboring gene Dmx like 2 Neighboring gene gliomedin Neighboring gene uncharacterized LOC135973922 Neighboring gene TNF alpha induced protein 8 like 3 Neighboring gene adaptor related protein complex 4 subunit epsilon 1 Neighboring gene secretogranin III

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Embryological ontogeny of aromatase gene expression in Chrysemys picta and Apalone mutica turtles: comparative patterns within and across temperature-dependent and genotypic sex-determining mechanisms. Valenzuela N, et al. Dev Genes Evol, 2007 Jan. PMID 17021865
    2. Cloning of estrogen receptor alpha and aromatase cDNAs and gene expression in turtles (Chrysemys picta and Pseudemys scripta) exposed to different environments. Marquez EC, et al. Comp Biochem Physiol C Toxicol Pharmacol, 2011 Sep. PMID 21664488
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aromatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in female gonad development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to estradiol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 19A1-like
    NP_001269172.1
    XP_008170489.1
    XP_065414164.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282243.1 → NP_001269172.1  cytochrome P450 19A1-like

      See identical proteins and their annotated locations for NP_001269172.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ195593
      UniProtKB/TrEMBL
      A0A8C3J002, B6E1W0
      Conserved Domains (1) summary
      pfam00067
      Location:47 → 480
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1138683v2

    Genomic

    1. NC_088800.1 Reference ASM1138683v2

      Range
      22193885..22239052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008172267.3 → XP_008170489.1  cytochrome P450 19A1-like isoform X1

      See identical proteins and their annotated locations for XP_008170489.1

      UniProtKB/TrEMBL
      A0A8C3J002, B6E1W0
      Related
      ENSCPBP00000040516.1
      Conserved Domains (1) summary
      pfam00067
      Location:47 → 480
      p450; Cytochrome P450

    2. XM_065558092.1 → XP_065414164.1  cytochrome P450 19A1-like isoform X1

      UniProtKB/TrEMBL
      A0A8C3J002, B6E1W0
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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