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    cenpq centromere protein Q [ Danio rerio (zebrafish) ]

    Gene ID: 101885540, updated on 4-Jan-2025

    Summary

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    Official Symbol
    cenpqprovided by ZNC
    Official Full Name
    centromere protein Qprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-200617-1
    See related
    Ensembl:ENSDARG00000041570 AllianceGenome:ZFIN:ZDB-GENE-200617-1
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be located in chromosome, centromeric region and nucleus. [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    human mouse all
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    Genomic context

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    See cenpq in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (532766..549521)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (537587..554342)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene si:ch73-41e3.7 Neighboring gene thioredoxin-like 4B Neighboring gene mitochondrial ribosomal protein L16 Neighboring gene C3a anaphylatoxin chemotactic receptor Neighboring gene microRNA 155

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. The ABCs of CENPs. Perpelescu M, et al. Chromosoma, 2011 Oct. PMID 21751032
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Potential readthrough

    Included gene: mrpl39

    Homology

    Clone Names

    • MGC162170

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    centromere protein Q

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328008.1 → NP_001314937.1  centromere protein Q

      Status: VALIDATED

      Source sequence(s)
      CU571081
      UniProtKB/TrEMBL
      A0A2R8QAK7, A0A8M1P9D8
      Related
      ENSDARP00000151560.1, ENSDART00000179731.1
      Conserved Domains (1) summary
      pfam13094
      Location:101 → 248
      CENP-Q; CENP-Q, a CENPA-CAD centromere complex subunit

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      532766..549521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials