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    LOC101885155 uncharacterized LOC101885155 [ Danio rerio (zebrafish) ]

    Gene ID: 101885155, updated on 12-Sep-2024

    Summary

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    Gene symbol
    LOC101885155
    Gene description
    uncharacterized LOC101885155
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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    Genomic context

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    See LOC101885155 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (41058225..41065343)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (41106308..41110028)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene si:dkey-16j16.4 Neighboring gene mitochondrial ribosomal protein L33 Neighboring gene ribokinase Neighboring gene BRISC and BRCA1 A complex member 2 Neighboring gene FOS like 2, AP-1 transcription factor subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC101885155

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      41058225..41065343
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021467516.2 → XP_021323191.1  uncharacterized protein LOC101885155

      UniProtKB/TrEMBL
      A0A8M9PLQ1
      Conserved Domains (4) summary
      cd01644
      Location:920 → 1141
      RT_pepA17; Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by ...
      pfam03564
      Location:261 → 390
      DUF1759; Protein of unknown function (DUF1759)
      pfam00665
      Location:1663 → 1755
      rve; Integrase core domain
      pfam05380
      Location:1155 → 1318
      Peptidase_A17; Pao retrotransposon peptidase

    RNA

    1. XR_002455981.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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