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    ATP6V1E1 ATPase H+ transporting V1 subunit E1 [ Ficedula albicollis (Collared flycatcher) ]

    Gene ID: 101822037, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ATP6V1E1
    Gene description
    ATPase H+ transporting V1 subunit E1
    See related
    Ensembl:ENSFALG00000009645
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ficedula albicollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
    Orthologs
    human mouse all
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    Genomic context

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    See ATP6V1E1 in Genome Data Viewer
    Location:
    chromosome: 1A
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current FicAlb1.5 (GCF_000247815.1) 1A NC_021672.1 (72649252..72660443)

    Chromosome 1A - NC_021672.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101819465 Neighboring gene BCL2 like 13 Neighboring gene BH3 interacting domain death agonist Neighboring gene uncharacterized LOC107604607 Neighboring gene protein tyrosine phosphatase receptor type O

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_021672.1 Chromosome 1A Reference FicAlb1.5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proton-transporting two-sector ATPase complex, catalytic domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V-type proton ATPase subunit E 1
    Names
    ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference FicAlb1.5 Primary Assembly

    Genomic

    1. NC_021672.1 Reference FicAlb1.5 Primary Assembly

      Range
      72649252..72660443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005040384.2 → XP_005040441.1  V-type proton ATPase subunit E 1

      See identical proteins and their annotated locations for XP_005040441.1

      UniProtKB/TrEMBL
      A0A803V0H7, U3K4W7
      Related
      ENSFALP00000016233.1, ENSFALT00000044334.1
      Conserved Domains (1) summary
      pfam01991
      Location:18 → 216
      vATP-synt_E; ATP synthase (E/31 kDa) subunit
    Nucleotide Protein
    Heading Accession and Version

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