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    LOC101763370 protein MIZU-KUSSEI 1 [ Setaria italica (foxtail millet) ]

    Gene ID: 101763370, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC101763370
    Gene description
    protein MIZU-KUSSEI 1
    Locus tag
    SETIT_025023mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Setaria italica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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    Genomic context

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    See LOC101763370 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Setaria_italica_v2.0 (GCF_000263155.2) III NC_028452.1 (29337256..29338071)
    101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675963.1 (29337881..29338696)

    Chromosome III - NC_028452.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g65560 Neighboring gene uncharacterized LOC111256757 Neighboring gene ras-related protein RGP2 Neighboring gene uncharacterized LOC101777820

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in hydrotropism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein MIZU-KUSSEI 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Setaria_italica_v2.0 Primary Assembly

    Genomic

    1. NC_028452.1 Reference Setaria_italica_v2.0 Primary Assembly

      Range
      29337256..29338071
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004963841.1 → XP_004963898.1  protein MIZU-KUSSEI 1

      UniProtKB/TrEMBL
      K3ZEM7
      Conserved Domains (1) summary
      pfam04759
      Location:84 → 267
      DUF617; Protein of unknown function, DUF617
    Nucleotide Protein Strain
    Heading Accession and Version

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