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    SYTL4 synaptotagmin like 4 [ Gorilla gorilla gorilla (western lowland gorilla) ]

    Gene ID: 101127413, updated on 1-Oct-2024

    Summary

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    Gene symbol
    SYTL4
    Gene description
    synaptotagmin like 4
    See related
    Ensembl:ENSGGOG00000001159
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gorilla gorilla gorilla (sub-species: gorilla)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
    Orthologs
    human mouse all
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    Genomic context

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    See SYTL4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) X NC_073247.2 (112447091..112502918, complement)
    RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) X NC_073247.1 (112438783..112494610, complement)

    Chromosome X - NC_073247.2Genomic Context describing neighboring genes Neighboring gene tenomodulin Neighboring gene tetraspanin 6 Neighboring gene sushi repeat containing protein X-linked 2 Neighboring gene double-strand-break repair protein rad21 homolog Neighboring gene small nucleolar RNA SNORA9 Neighboring gene cleavage stimulation factor subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neurexin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in exocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-like protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073247.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

      Range
      112447091..112502918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055376552.2 → XP_055232527.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    2. XM_055376544.1 → XP_055232519.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    3. XM_055376549.1 → XP_055232524.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    4. XM_055376553.1 → XP_055232528.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    5. XM_055376547.2 → XP_055232522.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    6. XM_055376554.2 → XP_055232529.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    7. XM_055376545.1 → XP_055232520.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    8. XM_055376546.1 → XP_055232521.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    9. XM_055376555.2 → XP_055232530.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    10. XM_019019799.3 → XP_018875344.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4
      Related
      ENSGGOP00000001144.3
      Conserved Domains (4) summary
      cd04020
      Location:498 → 663
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cd04029
      Location:359 → 483
      C2A_SLP-4_5; C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5
      cd15764
      Location:58 → 107
      FYVE_Slp4; FYVE-related domain found in synaptotagmin-like protein 4 (Slp4) and similar proteins
      cl22851
      Location:8 → 121
      PHD_SF; PHD finger superfamily

    11. XM_055376551.1 → XP_055232526.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4

    12. XM_055376548.1 → XP_055232523.1  synaptotagmin-like protein 4

      UniProtKB/TrEMBL
      G3QFR4
    Nucleotide Protein
    Heading Accession and Version

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