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    LOC100821495 uncharacterized LOC100821495 [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100821495, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100821495
    Gene description
    uncharacterized LOC100821495
    Locus tag
    BRADI_2g14820v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100821495 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (13282842..13287531, complement)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (13282623..13287293, complement)

    Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104582579 Neighboring gene probable GABA transporter 2 Neighboring gene jasmonic acid-amido synthetase JAR1 Neighboring gene mitochondrial adenine nucleotide transporter ADNT1 Neighboring gene uncharacterized LOC100827459

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100821495

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      13282842..13287531 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003567760.4 → XP_003567808.1  uncharacterized protein LOC100821495

      UniProtKB/TrEMBL
      I1HFX6
      Conserved Domains (1) summary
      pfam11331
      Location:245 → 287
      zinc_ribbon_12; Probable zinc-ribbon domain

    2. XM_014897989.2 → XP_014753475.1  uncharacterized protein LOC100821495

      UniProtKB/TrEMBL
      I1HFX6
      Conserved Domains (1) summary
      pfam11331
      Location:245 → 287
      zinc_ribbon_12; Probable zinc-ribbon domain
    Nucleotide Protein Strain
    Heading Accession and Version

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