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    LOC100815591 polycomb group protein EMBRYONIC FLOWER 2 [ Glycine max (soybean) ]

    Gene ID: 100815591, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100815591
    Gene description
    polycomb group protein EMBRYONIC FLOWER 2
    Locus tag
    GLYMA_20G069800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100815591 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 20 NC_038256.2 (24730509..24755433)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 20 NC_038256.1 (24813432..24838359)

    Chromosome 20 - NC_038256.2Genomic Context describing neighboring genes Neighboring gene microRNA MIR10193f Neighboring gene uncharacterized LOC106797736 Neighboring gene ethylene-responsive transcription factor ERF105 Neighboring gene uncharacterized LOC121174371

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polycomb group protein EMBRYONIC FLOWER 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038256.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      24730509..24755433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003556819.5 → XP_003556867.1  polycomb group protein EMBRYONIC FLOWER 2 isoform X1

      See identical proteins and their annotated locations for XP_003556867.1

      UniProtKB/TrEMBL
      A0A0R0HS69, K7N203
      Conserved Domains (1) summary
      pfam09733
      Location:458 → 595
      VEFS-Box; VEFS-Box of polycomb protein

    2. XM_006605639.4 → XP_006605702.1  polycomb group protein EMBRYONIC FLOWER 2 isoform X1

      See identical proteins and their annotated locations for XP_006605702.1

      UniProtKB/TrEMBL
      A0A0R0HS69, K7N203
      Conserved Domains (1) summary
      pfam09733
      Location:458 → 595
      VEFS-Box; VEFS-Box of polycomb protein

    3. XM_006605640.4 → XP_006605703.1  polycomb group protein EMBRYONIC FLOWER 2 isoform X2

      UniProtKB/TrEMBL
      A0A0R0HS69
      Conserved Domains (1) summary
      pfam09733
      Location:458 → 594
      VEFS-Box; VEFS-Box of polycomb protein

    4. XM_006605641.4 → XP_006605704.1  polycomb group protein EMBRYONIC FLOWER 2 isoform X3

      UniProtKB/TrEMBL
      A0A0R0HS69
      Conserved Domains (1) summary
      pfam09733
      Location:434 → 571
      VEFS-Box; VEFS-Box of polycomb protein

    5. XM_006605643.4 → XP_006605706.1  polycomb group protein EMBRYONIC FLOWER 2 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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    Other Literature Sources
    Molecular Biology Databases